Chi-Sheng (Michael) Chen 陳麒升

Chi-Sheng (Michael) Chen

I build machine-learning systems for clinical time series. My core research develops frequency-domain and geometric representations of physiological signals (FreqLens, SPD Token Transformer) and scales them into biosignal foundation models (Large Cognition Model); an EEG model I built is deployed in routine outpatient care at Taipei Veterans General Hospital's Precision Depression Intervention Center (PreDIC). I am a Research Affiliate at Harvard Medical School and Beth Israel Deaconess Medical Center (BIDMC), working with Prof. Gabriel Brat on multimodal EMS trauma triage. Previously: an AI Trainer contractor (via Mercor) for OpenAI, a Digital IC Design Engineer at MediaTek, and a research intern at the Max Planck Institute for Chemical Physics of Solids. I also co-founded Omnis Labs (AI × DeFi) — see Projects & Industry.

I hold an M.S. in Computer Science & Biomedical Engineering (NTU BEBI, College of EECS) from National Taiwan University, a B.Eng. in Physics (NCTU Electrophysics, College of Science) and a B.S. in Interdisciplinary Science (NCTU ISDP; Electrical Engineering, Life Sciences & Applied Mathematics) from National Chiao Tung University (now National Yang Ming Chiao Tung University).

I am applying to PhD programs (Fall 2027 start) in machine learning for physiological time series — interpretable, frequency-domain representations and foundation models for clinical biosignals, from EEG to EMS audio.

You can contact me at: m50816m50816 [at] gmail.com | chisheng.m.chen [at] gmail.com

Google Scholar Metrics as of Jul 2026
401
Citations
12
h-index
16
i10-index
45
Papers

News

Research Vision

Clinical Biosignals Time-Series AI Representation Learning Foundation Models Interpretability

My research builds machine learning for physiological time series along a single arc — from representation, to foundation models, to clinical deployment. Representation: I develop interpretable, clinician-interrogable frequency-domain and geometric representations of biosignals (FreqLens, FreqToken, SPD Token Transformer). Foundation models: I scale these into cross-task, cross-dataset, and multimodal biosignal models (Large Cognition Model, frequency-domain world models). Deployment: my EEG-based depression-treatment model is in routine outpatient use at the Precision Depression Intervention Center (PreDIC), Taipei Veterans General Hospital, and I build multimodal EMS trauma-triage pipelines at Harvard/BIDMC. As a secondary methodological line, I explore hybrid quantum-classical architectures for sequence modeling (QASA, QEEGNet).

Selected Publications

FreqLens: Interpretable Frequency Attribution for Time Series Forecasting
CS Chen, X Zhang, EJ Kuo, GY Chen, Q Xie, F Zhang.
arXiv preprint, 2026
Time-Series AI Interpretability Flagship
Large Cognition Model: Towards Pretrained EEG Foundation Model
CS Chen, YJ Chen, AHW Tsai.
arXiv preprint, 2025
Biosignals Foundation Models
Mind's Eye: Image Recognition by EEG via Multimodal Similarity-Keeping Contrastive Learning
CS Chen, CS Wei.
arXiv preprint, 2024
EEG Multimodal Contrastive Learning
A Unified SPD Token Transformer Framework for EEG Classification: Systematic Comparison of Geometric Embeddings
CS Chen, EJ Kuo, GY Chen, X Zhang, F Zhang.
arXiv preprint, 2026
EEG Riemannian Geometry Time-Series AI
EEG-based antidepressant prediction
Prediction of Antidepressant Responses to Non-Invasive Brain Stimulation Using Frontal EEG Signals
CT Li, CS Chen, CM Cheng, CP Chen, JP Chen, MH Chen, YM Bai, et al. [2nd author; derived from my master's thesis]
Journal of Affective Disorders (JAD), 2023
Clinical AI 🏥 Clinically deployed (PreDIC, Taipei VGH)
QEEGNet quantum EEG encoding
QEEGNet: Quantum Machine Learning for Enhanced Electroencephalography Encoding
CS Chen, SYC Chen, AHW Tsai, CS Wei.
IEEE International Workshop on Signal Processing Systems (SiPS), 2024
CS Chen, SYC Chen, HH Tseng.
Journal of Signal Processing Systems, 2025 (Extended Journal Version)
Quantum ML EEG
Res-VMamba fine-grained food classification
Res-VMamba: Fine-Grained Food Category Visual Classification Using Selective State Space Models with Deep Residual Learning
CS Chen, GY Chen, D Zhou, D Jiang, DS Chen.
arXiv preprint, 2024
CS Chen, GY Chen, D Zhou, D Jiang, DS Chen, SH Chang.
PLoS ONE, 2025 (Extended Journal Version)
Computer Vision State Space Models Most cited

→ Full Publication List

Research

Frequency-Domain & Geometric Representation Learning for Physiological Time Series

Interpretability Frequency-Domain Riemannian Geometry Biosignals PyTorch

My core research develops interpretable, clinician-interrogable representations of physiological time series, including FreqLens for frequency-domain attribution in forecasting and SPD Token Transformers for EEG classification with Riemannian geometry. These representations scale into cross-task, cross-dataset biosignal foundation models (Large Cognition Model). Applications extend to urban telecommunication forecasting and Transformer-assisted learning in open quantum systems (Lindblad dynamics).

Clinical AI & Deployment

EEG Multimodal AI Emergency Medicine Psychiatry PyTorch

Developing AI systems for clinical neuroscience and emergency medicine. My EEG-based depression treatment prediction models have been Clinically Deployed at the Precision Depression Intervention Center (PreDIC) at Taipei Veterans General Hospital, serving real outpatient patients. At Harvard/BIDMC, I am building real-time EMS triage pipelines using multimodal AI for trauma prediction, collaborating with surgeons on AI-assisted decision support systems. I also develop multimodal contrastive learning methods for EEG-image alignment, such as MUSE Stars.

Speech & Language for Healthcare

NLP Speech Recognition ASR LLM Clinical Documentation Whisper

Building speech and natural language processing systems for clinical settings, including EMS audio transcription, automated clinical documentation, and emergency page generation for trauma prediction workflows.

Quantum Machine Learning (secondary methodological line)

Variational Quantum Circuits Hybrid Quantum-Classical Transformer Qiskit PennyLane

As a secondary methodological line, I explore hybrid quantum-classical architectures for time-series and sequential data, including the Quantum Adaptive Self-Attention (QASA) Stars Transformer, QuantumRWKV, and QEEGNet Stars for quantum EEG classification. Applications span EEG signal processing, financial time-series forecasting, and image generation.

Computer Vision

State Space Models Fine-Grained Recognition Surgical Safety YOLO

Applying deep learning to visual recognition tasks, including surgical instrument detection for intraoperative safety, and fine-grained food classification with foundation models such as Res-VMamba Stars.

Research Experience

Department of Surgery, Harvard Medical School & Beth Israel Deaconess Medical Center MA, USA
Research Affiliate, Advisor: Prof. Dr. Gabriel Brat Nov 2024 – Present
Neuro Industry, Inc. CA, USA
Researcher, Co-Founder & CTO Mar 2024 – Jan 2025
Department of Computer Science, National Yang Ming Chiao Tung University Hsinchu, Taiwan
Research Assistant, Advisor: Prof. Chun-Shu Wei Dec 2023 – Aug 2024
Department of Surgery, National Taiwan University Hospital Taipei, Taiwan
Research Assistant, Advisor: Dr. Shuo-Lun Lai Jul 2021 – Sep 2021
Department of Psychiatry, Taipei Veterans General Hospital Taipei, Taiwan
Research Assistant, Advisor: Prof. Dr. Cheng-Ta Li Sep 2019 – Jun 2021
Max Planck Institute for Chemical Physics of Solids (MPI CPfS) Dresden, Germany
Research Internship, Advisor: Dr. Alexander Komarek & Dr. Li Zhao Jul 2018 – Sep 2018

Projects & Industry

Omnis Labs Remote
Co-Founder Sep 2024 – Present
Contractor (via Mercor) for OpenAI Remote (US)
AI Trainer Mar 2025 – Oct 2025
MediaTek Inc. Hsinchu, Taiwan
Digital IC R&D Engineer Dec 2021 – Oct 2023

Education

National Taiwan University (NTU) Taipei, Taiwan
M.S., Graduate Institute of Biomedical Electronics and Bioinformatics (BEBI), College of EECS Sep 2019 – Jun 2021
National Chiao Tung University (NCTU) Hsinchu, Taiwan
B.Eng., Department of Electrophysics, College of Science Sep 2015 – Jun 2019
B.S., Interdisciplinary Science Degree Program, College of Science

Skills

AI / ML & Deep Learning

PyTorch JAX HuggingFace Transformers Scikit-learn MLflow Weights & Biases Diffusion Models State Space Models (Mamba) Contrastive Learning GNN MNE-Python (EEG)

LLMs, Agents & RAG

LoRA / QLoRA SFT / DPO / RLHF MoE Quantization (GPTQ / AWQ) vLLM OpenAI SDK Anthropic SDK Gemini SDK LangChain / LangGraph Ollama RAG (pgvector / FAISS / Qdrant) Tool Use / ReAct Multi-Agent Orchestration Prompt Engineering

Quantum Machine Learning

PennyLane Qiskit Cirq TensorFlow Quantum Variational Quantum Circuits Hybrid Quantum-Classical Models Quantum RL

MLOps, Cloud & Infrastructure

Docker Kubernetes CI/CD (GitHub Actions) GCP (Vertex AI, Cloud Run, BigQuery) AWS Supabase Prometheus / Grafana Model & Feature Versioning

Quant & Finance Engineering

Backtesting Factor Modeling AMM / DEX Strategy Design On-Chain Data Pipelines Event & Sentiment Extraction pandas / NumPy / statsmodels Solidity (read-only)

Programming & Systems

Python C / C++ Rust JavaScript / TypeScript Next.js MATLAB R SQL (PostgreSQL / MySQL) Git / Linux Verilog / SystemVerilog / UVM

AI-Powered Dev Tools

Cursor Claude Code GitHub Copilot TDD / Spec-Driven Development

Languages

Chinese (Native)  ·  English (Fluent — 1.5+ years working at Harvard/BIDMC and OpenAI)

Professional Service

Reviewer for 31 journals (incl. TPAMI, NSR, npj Quantum Information, Scientific Reports, JBHI, IEEE IoT Journal, ACM TORS), 5 top conferences (NeurIPS / ICML / KDD / MICCAI / ICASSP 2026), Program Committee of QNRL Workshop @ IEEE WCCI 2026, and NLDL 2027.

Program Committee

Conference Reviewer

NeurIPS 2026, ICML 2026 (Gold Reviewer — top tier), KDD 2026, MICCAI 2026, ICASSP 2026

Northern Lights Deep Learning Conference (NLDL) 2027

Journal Reviewer (2025–present)

Teaching

NYCU General Physics AI Tutor
General Physics AI Teaching Assistant
Designed and deployed a comprehensive RAG-based AI tutoring system for the "General Physics" course at NYCU. Expanded feature set covering full undergraduate physics curriculum with adaptive content delivery, problem-solving guidance, and concept reinforcement.
Next.js RAG Gemini AI Supabase pgvector Vercel AI SDK Serving NYCU Students
NYCU EP Laser Physics AI Tutor
Laser Physics AI Teaching Assistant
Designed and deployed a RAG-based AI tutoring system for the "Introduction to Lasers" course at NYCU Department of Electrophysics. Features 8 learning modes including adaptive quiz generation, exam simulation, interactive concept knowledge graph, and spaced-repetition study planning.
Next.js RAG Gemini AI Supabase pgvector Vercel AI SDK Serving NYCU Students
National Chiao Tung University (NCTU) — Department of Biology and Technology Hsinchu, Taiwan
Teaching Assistant, Synthetic Biology II Sep 2016 – Sep 2017

Invited Talks & Presentations

Digital Humanities 2026 (DH2026) — Daejeon, South Korea
Two short-paper presentations, Jul 27–31, 2026 (upcoming)
1. "Predicting Poets' Origins from Verse: A Computational Analysis of Regional Linguistic Fingerprints in the Complete Tang Poems"
2. "Gendered Voices in Tang Poetry: A Corpus-Based Study of Female-Authored Poems and Male-Adopted Female Perspectives"
NLP Digital Humanities
IEEE ICASSP 2026 — Barcelona, Spain
Two oral presentations, May 2026
1. "Quantum Reinforcement Learning-Guided Diffusion Model for Image Synthesis via Hybrid Quantum-Classical Generative Model Architectures"
2. "Quantum Adaptive Self-Attention for Financial Rebalancing: An Empirical Study on Automated Market Makers in Decentralized Finance"
Quantum ML Finance
Chi-Sheng Chen presenting two posters at NVIDIA GTC 2026
IEEE Quantum Week — QCE 2025 — Albuquerque, NM, USA
Paper presentation, Aug–Sep 2025
"Quantum Reinforcement Learning Trading Agent for Sector Rotation in the Taiwan Stock Market"
Quantum ML Finance
IEEE ICASSP 2025 — Hyderabad, India
Oral presentation, Apr 2025
"Quantum Multimodal Contrastive Learning Framework"
Quantum ML Multimodal

Awards & Achievements